Does coexistence solve the prebiotic information problem?

نویسندگان

  • Sergio Branciamore
  • Walter de Back
  • Enzo Gallori
چکیده

The information problem in prebiotic evolution arises from constraints on the amount of information that can be maintained in Darwinian evolution. The error threshold limits the transmissible length of a template under high mutation load. Existing solutions to the error threshold assume that the primitive genome consisted of multiple coexisting unlinked templates. Such coexistence requires a mechanism of cooperation to counterweigh competitive exclusion. Although much attention is given to ecological coexistence properties of cooperation mechanisms, little is known about the information carrying capacity of these systems under high mutation rates. Template coexistence may escape the error threshold, but it simultaneously raises the new problem of maintaining cooperation. Cooperation is threatened by the production of parasites through mutation. This results in an additional constraint on the information content in a template ensemble, which we call the ’parasite threshold’. If the parasite threshold of cooperative system is lower than the error threshold, template coexistence does not solve the prebiotic information problem. We study the information carrying potential in a spatial eco-evolutionary model, based on the metabolic model (Czárán and Szathmáry, 2000). We define a surface in which each site is either empty or occupied by a molecule. A genome consists of d different templates of length l=i/d nucleotides, where i is the information content of the genome. We assume that replication of a template is only possible when all d functional template types are present in the local neighborhood. Mutation in a functional template results in a nonfunctional parasitic copy, with probability m per nucleotide. Growth and decay rates of of functional molecules and parasites are equal. Every reaction step is followed by diffusion of the molecules over the surface. Genomes with varying number of fragments (d=1,...,4) are compared under high mutation load (m=0.01). We observed the parasite numbers and the maximum maintainable genomic information. Our results show that, surprisingly, the information storage capacity is highest for unfragmented, single replicator, genomes (d=1), despite their high production of parasite. While the number of parasites decreases with the number of templates, the vulnerability of fragmented genomes to parasitism sharply increases. Because the latter effect outweighs the former, the benefit of template coexistence is lost. When the different genomic strategies are put in direct competition with each other, fragmentation can out-compete the single template genome, but only in a situation with low mutational rate, and length-dependent growth rate. Close to the error threshold, however, fragmented genomes are competitively excluded by the single template strategy. We conclude that template coexistence by itself does not solve the prebiotic information problem, because cooperative systems are limited by the ’parasite threshold’. We demonstrate that in the metabolic model, template coexistence does not increase information content and is excluded in direct competition. Although more realistic conditions concerning catalytic specificity, length-dependent neutrality and growth may refine these results, it is clear that limitations arising from cooperation must be taken into account in solving the information problem in prebiotic evolution.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Package models and the information crisis of prebiotic evolution.

The coexistence between different types of templates has been the choice solution to the information crisis of prebiotic evolution, triggered by the finding that a single RNA-like template cannot carry enough information to code for any useful replicase. In principle, confining d distinct templates of length L in a package or protocell, whose survival depends on the coexistence of the templates...

متن کامل

Preservation of information in a prebiotic package model.

The coexistence between different informational molecules has been the preferred mode to circumvent the limitation posed by imperfect replication on the amount of information stored by each of these molecules. Here we reexamine a classic package model in which distinct information carriers or templates are forced to coexist within vesicles, which in turn can proliferate freely through binary di...

متن کامل

Emotions and information seeking: how does emotion manifest in infor-mation seeking behavior?

Background and Aim: Information seeking behavior arises when one feels a void in his/her knowledge which inspires one to acquire new information. The central point in explaining behavior is the fact that many features influence its occurrence, and emotions are considered to be a major element involved in human information behavior.  Also, Information seeking is a positive and negative emotional...

متن کامل

Template coexistence in prebiotic vesicle models

The coexistence of distinct templates is a common feature of the diverse proposals advanced to resolve the information crisis of prebiotic evolution. However, achieving robust template coexistence turned out to be such a difficult demand that only a class of models, the so-called package models, seems to have met it so far. Here we apply Wright’s Island formulation of group selection to study t...

متن کامل

Solving Traveling Salesman Problem based on Biogeography-based Optimization and Edge Assembly Cross-over

Biogeography-Based Optimization (BBO) algorithm has recently been of great interest to researchers for simplicity of implementation, efficiency, and the low number of parameters. The BBO Algorithm in optimization problems is one of the new algorithms which have been developed based on the biogeography concept. This algorithm uses the idea of animal migration to find suitable habitats for solvin...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2008